chr1:11793905:A>G Detail (hg38) (MTHFR)

Information

Genome

Assembly Position
hg19 chr1:11,853,962-11,853,962 View the variant detail on this assembly version.
hg38 chr1:11,793,905-11,793,905

HGVS

Type Transcript Protein
RefSeq NM_005957.4:c.1530+2T>C
Ensemble ENST00000376583.7:c.1653+2T>C
ENST00000376585.6:c.1653+2T>C
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 607093 OMIM
HGNC 7436 HGNC
Ensembl ENSG00000177000 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic no assertion criteria provided Homocystinuria due to methylene tetrahydrofolate reductase deficiency germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.362 HOMOCYSTINURIA DUE TO DEFICIENCY OF N(5,10)-METHYLENETETRAHYDROFOLATE REDUCTASE ACTIVITY NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_005957.5(MTHFR):c.1530+2T>C AND Homocystinuria due to methylene tetrahydrofolate reductase defici... ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs786204027 dbSNP
Genome
hg38
Position
chr1:11,793,905-11,793,905
Variant Type
snv
Reference Allele
A
Alternative Allele
G
Genome browser